BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C08SP1|AL428877
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1437 1362 0.0
3x_Contig871 368 e-101
>3x_Contig1437
Length = 8480
Score = 1362 bits (685), Expect = 0.0
Identities = 688/691 (99%)
Strand = Plus / Minus
Query: 1 tttcggaccttcgtagcggtattttctagggaggaccgcttatgacggtcgaactacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tttcggaccttcgtagcggtattttctagggaggaccgcttatgacggtcgaactacaat 632
Query: 61 tcttctaagatgatcaccgttgagcttaaaaataaccgcagctctgacgaaggattacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tcttctaagatgatcaccgttgagcttaaaaataaccgcagctctgacgaaggattacga 572
Query: 121 aatatccattacgtttttctctgtggaaaggcttgatattttgttattcattccgaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aatatccattacgtttttctctgtggaaaggcttgatattttgttattcattccgaatct 512
Query: 181 agctgcaaaacctggatcagaattgatgggcaactggaacggcatcaacgaaaaatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agctgcaaaacctggatcagaattgatgggcaactggaacggcatcaacgaaaaatttct 452
Query: 241 cttctcgaatttttctggttgtttatcctctgacctccaactttcttccttctgtcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cttctcgaatttttctggttgtttatcctctgacctccaactttcttccttctgtcaaca 392
Query: 301 acttgtttcaatcaacatttatcttttaatcaactcctatttcatctttttatccattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 acttgtttcaatcaacatttatcttttaatcaactcctatttcatctttttatccattat 332
Query: 361 ctgcctctatttgtattctttacaagctcataacagaagtatcatcaaacaaactatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctgcctctatttgtattctttacaagctcataacagaagtatcatcaaacaaactatcat 272
Query: 421 ccaactgtaagttgaaagaaatctgtgaaaaaatacacaacaacaaaactcacccccagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccaactgtaagttgaaagaaatctgtgaaaaaatacacaacaacaaaactcacccccagt 212
Query: 481 cgttcctttaaaacaaaacccaaattatctttgttgaagccataaaataataaagctttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cgttcctttaaaacaaaacccaaattatctttgttgaagccataaaataataaagctttg 152
Query: 541 tttgcaaatttaagaatactataatakactactccaaactccatttccgttgaaataagt 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 151 tttgcaaatttaagaatactataatatactactccaaactccatttccgttgaaataagt 92
Query: 601 tgcagtagcctcaatattatattarracctttactctcgttaaaaaaagaattaagattc 660
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 91 tgcagtagcctcaatattatattaaaacctttactctcgttaaaaaaagaattaagattc 32
Query: 661 attcatcaagagtcgtgacatcgttcaagat 691
|||||||||||||||||||||||||||||||
Sbjct: 31 attcatcaagagtcgtgacatcgttcaagat 1
>3x_Contig871
Length = 4172
Score = 368 bits (185), Expect = e-101
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 725 ctgattggaaataataaaatgcaattcaagaaagttattgtgccaactttgatctcagcc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ctgattggaaataataaaatgcaattcaagaaagttattgtgccaactttgatctcagcc 70
Query: 785 gccgctttggtcaatgctgacggtgaaggtgaagttaccacgacttacacttctactatc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gccgctttggtcaatgctgacggtgaaggtgaagttaccacgacttacacttctactatc 130
Query: 845 accctttacaccacctctttctctccagaggaattgtcttcaatttcctccgagtctgct 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 accctttacaccacctctttctctccagaggaattgtcttcaatttcctccgagtctgct 190
Query: 905 gcttc 909
|||||
Sbjct: 191 gcttc 195
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8526
Number of Sequences: 1807
Number of extensions: 8526
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 2
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)